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Index
A
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C
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F
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G
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K
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L
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M
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N
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R
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T
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V
A
abagen.allen
module
abagen.correct
module
abagen.datasets
module
abagen.images
module
abagen.io
module
abagen.matching
module
abagen.mouse
module
abagen.reporting
module
annot_to_gifti() (in module abagen)
atlas (abagen.AtlasTree property)
atlas_info (abagen.AtlasTree property)
AtlasTree (class in abagen)
available_gene_info() (in module abagen.mouse)
available_structure_info() (in module abagen.mouse)
available_unionization_info() (in module abagen.mouse)
C
centroids (abagen.AtlasTree property)
check_atlas() (in module abagen)
closest_centroid() (in module abagen.matching)
coords (abagen.AtlasTree property)
F
fetch_allenref_genes() (in module abagen.mouse)
fetch_allenref_structures() (in module abagen.mouse)
fetch_desikan_killiany() (in module abagen)
fetch_donor_info() (in module abagen)
fetch_freesurfer() (in module abagen)
fetch_fsaverage5() (in module abagen.datasets)
fetch_fsnative() (in module abagen.datasets)
fetch_gene_group() (in module abagen)
fetch_microarray() (in module abagen)
fetch_raw_mri() (in module abagen)
fetch_rnaseq() (in module abagen)
fetch_rubinov2015_structures() (in module abagen.mouse)
fill_label() (abagen.AtlasTree method)
G
gen_report() (abagen.Report method)
get_centroids() (in module abagen.matching)
get_expression_data() (in module abagen)
get_gene_info() (in module abagen.mouse)
get_interpolated_map() (in module abagen)
get_samples_in_mask() (in module abagen)
get_structure_coordinates() (in module abagen.mouse)
get_structure_info() (in module abagen.mouse)
get_unionization_from_gene() (in module abagen.mouse)
graph (abagen.AtlasTree property)
K
keep_stable_genes() (in module abagen)
L
label_samples() (abagen.AtlasTree method)
labels (abagen.AtlasTree property)
leftify_atlas() (in module abagen)
M
match_closest_centroids() (abagen.AtlasTree method)
module
abagen.allen
abagen.correct
abagen.datasets
abagen.images
abagen.io
abagen.matching
abagen.mouse
abagen.reporting
N
normalize_expression() (in module abagen)
R
read_annotation() (in module abagen.io)
read_counts() (in module abagen.io)
read_genes() (in module abagen.io)
read_microarray() (in module abagen.io)
read_ontology() (in module abagen.io)
read_pacall() (in module abagen.io)
read_probes() (in module abagen.io)
read_tpm() (in module abagen.io)
relabel_gifti() (in module abagen)
remove_distance() (in module abagen)
Report (class in abagen)
T
tree (abagen.AtlasTree property)
triangles (abagen.AtlasTree property)
V
volumetric (abagen.AtlasTree property)
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